Capacity Building Is Key to Africa’s Digital Sequencing Success Story

Africa, Biodiversity, Conferences, COP16, Development & Aid, Economy & Trade, Editors’ Choice, Featured, Food and Agriculture, Food Security and Nutrition, Food Sustainability, Headlines, Natural Resources, Sustainable Development Goals, TerraViva United Nations

Biodiversity

The International Livestock Research Institute is using genomics to breed livestock suited to local conditions and production systems to meet community needs. Credit: Busani Bafana/IPS

The International Livestock Research Institute is using genomics to breed livestock suited to local conditions and production systems to meet community needs. Credit: Busani Bafana/IPS

BULAWAYO, Oct 22 2024 (IPS) – Christian Tiambo has always wished to uplift local farmers’ communities through cutting-edge science.


As climate change wreaked havoc on local agriculture, Tiambo, a livestock scientist at the Centre for Tropical Livestock Genetics and Health (CTLGH) and at the International Livestock Research Institute (ILRI), focused on conserving and developing livestock that could withstand environmental stress.

Genomics, a Game Changer

Tiambo’s research took an exciting turn when part of his PhD studies was to characterize and establish local poultry populations with interesting resilience potential. Yet, the need for local access to advanced genomic tools was a barrier to fully unlocking this potential.

Today, the power of digital data and sequencing information is transformative. It is driving the discovery of genes and innovation in agriculture through the identification and deep characterization of pathogens in plants and animals. That is helping scientists to breed livestock suited to local conditions and production systems, thereby benefiting local communities that have been custodians of genetic resources for generations.

But there is a catch: Africa, like other parts of the global south, is a genetic goldmine but has not fully capitalized on the digital sequencing information (DSI) derived from its genetic heritage. DSI is a tool that provides information for the precise identification of living organisms and allows the development of diagnosis tools and technologies for conservation in animals and plants. Besides, DSI is also used in investigating the relationships within and between species and in plant and animal breeding to predict their breeding value and potential contribution to their future generations.

Tiambo said DSI can be used to adjust the genotypes and produce animals with desired traits, adapted to local conditions but which have higher productivity.

A promising innovation has been the development of surrogate technologies in poultry, small ruminants, cattle or pigs—giving opportunity to local and locally adapted and resilient breeds to carry and disseminate semen from improved breeds in challenging environments.

“Farmers would not need to keep requesting inseminators and semen from outside their village,” Tiambo explained, noting that this shift could dramatically improve livestock breeding, dissemination of elite genetics, boost food security and alleviate poverty in remote rural areas of Africa.

Global cooperation among stakeholders of the Kunming-Montreal Global Biodiversity Framework is key to establishing international guidelines on benefit-sharing from animal genetics resources and their associated information, including DSI.

Christian Tiambo, a livestock scientist at the Centre for Tropical Livestock Genetics and Health. Credit: ILRI

Christian Tiambo, a livestock scientist at the Centre for Tropical Livestock Genetics and Health. Credit: ILRI

Using genetics and associated traditional knowledge includes adapting specific livestock to specific environments. This contributes to the development of improved and elite tropical animal breeds with particular traits that meet community needs to improve livelihoods, he said.

“Local livestock is not just for food but is our heritage, culture and social value,” said Tiambo, adding that conserving livestock is conserving local culture, social ethics and inclusion, with gender aspects being considered. For example, the Muturu cattle and the Bakosi cattle in Nigeria and Cameroon are animals used in dowry, The Bamileke cattle remain sacred and maintain the ecosystem of sacred forest in part of the western highlands of Cameroon.

“I have never seen any traditional ceremony done with exotic chicken in any African village,” he said.

Genetics and DSI, according to Tiambo, are “game changers” in breeding livestock with desired traits faster. What used to take five to seven years or more, he says, can now be done in just three or four cycles with the help of genomics.

ILRI has been working with the Roslin Institute, the Kenyan Agricultural and Livestock Research Organization and collaborating with the African Union-InterAfrican Bureau for Animal Resources (AU-IBAR), the National Biosafety Authority, farmer communities, and National Agricultural Research Systems (NARS) in Africa and Southeast Asia in the conservation and development of improved local chicken using stem cell technologies.

Bridging the Capacity Gap

DSI needs infrastructure and human resources. “A lot of infrastructure, equipment and skills are coming from outside Africa, but how can we also generate DSI and use it locally?” Tiambo asked. He worries that without developing local capacity to harness DSI, “a lot of helicopter research will still be happening in Africa where people fly in, just pick what they want, fly out, and no scientists in Africa are involved in generating and using DSI.”

Technologically advanced countries have often exploited these genetic resources, developing commercial products and services without clear mechanisms for sharing the monetary and non-monetary benefits with local communities as ethics and common sense would require—an injustice that needs urgent correction.

The use of DSI on genetic resources is one of the four goals of the Kunming-Montreal Global Biodiversity Framework adopted in 2022 with the aim of stopping global biodiversity loss by 2030.

ThankGod Ebenezer, bioinformatician and co-founder of the African BioGenome Project, argues that Africa must seize this moment to build and strengthen local capacity to produce and use DSI from genetic resources.

“The establishment of a benefit-sharing mechanism for DSI is a first step in the right direction and Africa needs to maximise even this first step by putting in a framework to generate and make use of DSI locally,” Ebenezer told IPS, explaining that Africa needs to be able to do genetic sequencing on the ground with local scientists having the capacity to translate and use it.

The Africa BioGenome Project, of which Tiambo is also a founding member, is a continental biodiversity conservation initiative that has laid out a roadmap for how Africa can benefit from DSI and the planned multilateral fund.

“The main benefit comes from being able to use DSI and ultimately share it with the global community in line with the national and international rules and regulations,” said Ebenezer. “Because if you cannot use DSI yourself, you will always feel like a supplier, like someone who gets crude oil from the ground and asks someone else to add value to it and gets several products.”

“The multilateral fund is key,” Ebenezer stresses. “If someone converts DSI into revenue, for instance, they’re only looking at paying 1% back into the fund. Is that enough for the communities that hold this biodiversity?”

At COP16 in Colombia (Oct 21-Nov 1, 2024), world leaders will discuss mechanisms for fair and equitable sharing of DSI benefits, a critical step for Africa and other biodiversity-rich regions. For example, Africa hosts eight of the 34 biodiversity hotspots in the world, according to the Intergovernmental Platform on Biodiversity and Ecosystem Services (IPBES).

“In terms of the negotiation, we would like the DSI fund to be approved so that it’s ready for implementation because this is an implementation COP,” Susana Muhamad, Minister of Environment and Sustainable Development of Colombia and COP16 President-designate, told a press briefing ahead of COP16.

“We would like the decision of the parties to give the COP the teeth for implementation. One is the DSI,” Muhamad said.

Astrid Schomaker, Executive Secretary of the UN Convention on Biological Diversity, is hopeful that COP16 will operationalize the multilateral mechanism for the sharing of benefits from the use of digital sequencing information in genetic research.

“We are going to look at that. And I think it’s a very complex term and issue, but it is ultimately about how those industries, sectors and companies that use digital sequence information on genetic resources that are often located in the global south, but not exclusively, how they use it and how they pay for using it,” said Schomaker, noting that COP15 agreed to establish a multilateral mechanism and a Fund for DSI.

The fair and equitable sharing of benefits arising out of the use of genetic resources is one of the three objectives of the CDB, including the conservation of biological diversity and sustainable use of its components. Target 18 of the CBD seeks to reduce harmful incentives by at least USD 500 billion per year by 2030, money that could be channelled to halting biodiversity loss.

The World Resources Institute (WRI), in a position paper, has urged COP16 to provide more finance and incentives to support nature and biodiversity goals.

There is currently a USD 700 billion gap between annual funding for nature and what’s needed by 2030 to protect and restore ecosystems, the WRI said, noting that “many of the world’s most biodiverse ecosystems—and biggest carbon sinks—are in developing countries that cannot save them without far more financial support.”

The WRI commented that bringing in more private sector finance will require incentives, which can come from policy and regulation as well as market-based strategies to make investments in nature more attractive.

But this should not substitute for shifting harmful subsidies and delivering international public finance to the countries that need it most, WRI argued.

As the world scrambles to stop biodiversity loss by 2030, the upcoming COP16 discussions could be pivotal in ensuring that Africa finally benefits from its own genetic wealth.

IPS UN Bureau Report

 

IPBES Calls for Holistic Solutions, Transformative Change in Tackling Biodiversity Loss

Biodiversity, Climate Change, Conferences, Conservation, Editors’ Choice, Environment, Featured, Food and Agriculture, Food Sustainability, Global, Headlines, Health, Natural Resources, TerraViva United Nations

Biodiversity

Biodiversity is key to food security and nutrition. IPBES has warned that loss of biodiversity is accelerating around the world, with 1 million animal and plant species threatened with extinction. Credit: Busani Bafana/IPS

Biodiversity is key to food security and nutrition. IPBES has warned that loss of biodiversity is accelerating around the world, with 1 million animal and plant species threatened with extinction. Credit: Busani Bafana/IPS

BULAWAYO, Oct 11 2024 (IPS) – A holistic approach and transformative change of systems are needed to tackle biodiversity loss and to put the world on a sustainable path, an assessment by the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES) has recommended.


The world is facing an interconnected crisis of unprecedented biodiversity loss, food insecurity, and environmental degradation that can no longer be tackled through fragmented and piecemeal solutions, a forthcoming assessment by IPBES will show, calling for holistic approaches instead. 

IPBES is set to launch two scientific assessments, the  Nexus Assessment and Transformative Change Assessment, in December 2024, which recommend holistic solutions to tackling the connected and converging crises of biodiversity, water, food, health, and climate change because’ “siloed” approaches are proving unsuccessful.’

In addition, the assessment calls for urgent “transformative change” by intergovernmental bodies, private sector organizations and civil society to respond to the nature and climate crises.

IPBES is an intergovernmental organization established to improve the interface between science and policy on issues of biodiversity and ecosystem services.

The historic IPBES Global Assessment Report of 2019 found that meeting global sustainability targets for 2030 and beyond requires a fundamental, system-wide reorganization, including new paradigms.

IPBES Head of Communications, Rob Spaull, said the assessments represent the best science evidence for critical action to tackle biodiversity loss available to policymakers.

“This is the most ambitious science report we have done because these five issues by themselves are complex and this assessment  pulls them together,” Spaull said in a pre-report launch media briefing this week.

The Nexus Assessment identifies important trade-offs and opportunities within the multi-dimensional polycrisis: To what extent do efforts to address one crisis add to others? And which policy options and actions would produce the greatest benefits across the board? The report will offer an unprecedented range of responses to move decisions and actions beyond single-issue silos. The report was produced over three years by 101 experts in 42 countries.

“Global crises in biodiversity, water, food, health and climate change often intensify each other when addressed separately and should therefore be tackled together,” said Paula Harrison, co-chair of the IPBES Nexus Assessment report, in a statement.

“The Nexus Assessment is among the most ambitious work ever undertaken by the IPBES community, offering an unprecedented range of response options to move decisions and actions beyond single issue silos.”

The Transformative Change Assessment looks at the underlying causes of biodiversity loss, determinants of transformative change and options for achieving the 2050 Vision for Biodiversity. The report also assesses the determinants of transformative change, the biggest obstacles it faces and how it occurs. It also identifies achievable options to foster, accelerate and maintain transformative change towards a sustainable world and the steps to achieve global visions for transformative change.

A statement by IPBES notes that the Transformative Change Report will provide decision-makers, including policymakers, with “the best available evidence, analysis and options for actions leading to transformative change and build an understanding of the implications of the underlying causes of biodiversity loss for achieving the Paris Climate Agreement, global biodiversity targets under the Kunming-Montreal Global Biodiversity Framework, the Sustainable Development Goals and other major international development objectives.”

The 11th session of the IPBES Plenary, the first ever to take place in Africa from December 10 to 16, will discuss and approve the reports. IPBES represents nearly 150 governments and seeks to strengthen the science-policy interface for biodiversity and ecosystem services.

Spaull said the assessments underline the need to find holistic solutions to addressing biodiversity loss.

“The assessments are looking at how when you try and fix one part of the system you have unintended consequences in other parts of the system; for instance, in many countries there is a big push to plant trees to mitigate climate change and for carbon sequestration and with (unintended) consequences for biodiversity. For example, planting one kind of tree may be damaging to the ecology or water supply and also have an impact on health, so it means there is a need to find a balance.”

He said the reports also highlight responding to issues simultaneously, which is also the emphasis on meeting the SDGs, which have to be addressed systematically rather than in silos.

“For example, there has been a big increase in the volume of food production in past decades and an increase in caloric output that has helped global health but on the other hand, this has resulted in biodiversity loss because the massive food production has been done through intensive agriculture methods that deplete water and have massive gas emissions,” said Spaull.

Furthermore, IPBES has influenced and shaped national and international biodiversity policy through providing policymakers with clear, scientifically based recommendations and helping governments make informed decisions about conservation, sustainable development, and environmental protection.

Through its assessments, IPBES highlights the interconnectedness of biodiversity, human health, economic stability, and environmental sustainability, making it a critical player in the global response to the biodiversity crisis.

Spaull noted that IPBES work has been instrumental in informing progress assessments on biodiversity-related SDGs.

IPS UN Bureau Report

 

Scientific Panel’s Scoping Report Instructive for Global Food Systems Transformation

Biodiversity, Conferences, Environment, Featured, Food and Agriculture, Food Security and Nutrition, Food Sustainability, Global, Green Economy, Headlines

Biodiversity

A fisherman displays his catch of the day in Dominica. Credit: Alison Kentish/IPS

DOMINICA, Sep 24 2021 (IPS) – On September 10th, on a sweltering summer afternoon, three fishers drove a van around the residential community of Castle Comfort in Dominica, blowing forcefully into their conch shells – the traditional call that there is fresh fish for sale in the area.


One of the men, Andrew Joseph, urged a customer to double her purchase of Yellowfin Tuna, stating that at five Eastern Caribbean dollars a pound (US$1.85), she was getting the deal of the summer. (In the lean season, that price can double).

“It’s good fish, it’s fresh, it’s cheap,” he told IPS, adding that, “People eat too much meat. This is what is good for the body and the brain.”

Little did he know that he was echoing the words of a scientist who is rallying the world, and the landmark United Nations Food Systems Summit (UNFSS) to put greater emphasis on the financial, nutritional and traditional benefits of aquatic foods.

“Foods coming from marine sources, inland sources, food from water, they are superfood, but this is being ignored in the global debate and at the country level, because we have had a focus on land production systems and we have to change that,” Shakuntala Haraksingh Thilsted, Global Lead for Nutrition and Public Health at World Fish told IPS.

The nutrition scientist is also the Vice-Chair of Action Track 4, Advancing Equitable Livelihoods, at the UNFSS.

As the landmark summit hopes to deliver urgent change in the way the world thinks about, produces and consumes food, issues like the linkages between aquatic systems and health are emerging.

So are other linkages a scoping report by the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES) says the world cannot ignore. The report, approved in June, paves the way for a 3-year assessment of the interlinkages among biodiversity, water, food and health.

In the case of the UNFSS, it shows how food systems transformation can be achieved if tackled as one part of this network.

“It will assess the state of knowledge, including indigenous and local knowledge, on past, present, and possible future trends in these interlinkages, with a focus on biodiversity and nature’s contributions to people,” IPBES Executive Secretary Dr Anne Larigauderie told IPS.

“The IPBES nexus assessment will contribute to the development of a strengthened knowledge base for policymakers for the simultaneous implementation of the post-2020 global biodiversity framework, under the Convention on Biological Diversity, and the Paris Agreement adopted under the United Nations Framework Convention on Climate Change and the 2030 Agenda for Sustainable Development.”

Landscape Ecology Professor Ralf Seppelt was one of the scoping experts for the nexus assessment. He says the science is clear on how food systems impact biodiversity and why agroecology must be a pillar of efforts to transform food systems.

“Micronutrients are lacking a lot. Micronutrients are provided by fruits and vegetables, which need pollination. So, the nexus is really strong between agroecological principles and the nutritional value of what we are producing,” he told IPS.

“Wherever we have to increase production, we should do it on agroecological principles. We should consider what farmers say and do, their needs, their access to production goods such as fertilizers and seeds, and it’s equally important to change our diets. It’s not just reducing harvest losses and food waste, but also about moving away from energy-rich, meat-based diets and feeding ourselves in an environmentally friendly way,” he said.

Professor Seppelt is also hoping that the voices of small farmers and indigenous communities are amplified in the global food transformation conversation. “IPBES made an enormous effort to work with indigenous peoples and local communities and include indigenous and local knowledge in its reports. We organized workshops, to collect a diversity of views about nature and its contributions to people, or ecosystem services to make the assessment as relevant as possible to a range of users,” he said.

For Thilsted, any plan to revamp food systems must come with a commitment to weed out inequality. She says from access to inputs and production to consumption and waste, inequality remains a problem.

“This unequal distribution of who wins, who loses, who does well, who does not do too well, who profits and who does not is putting a strain on food and nutrition and it is limiting our progress towards a sustainable development future,” she told IPS.

“COVID-19 has shown the fragility of the system and it is further displacing the vulnerable, for example, women and children who are being more exposed to food and nutrition insecurity.”

The IPBES nexus assessment hopes to better inform policymakers on these key issues.

It is not the first assessment of interlinkages. Earlier this year IPBES and the Intergovernmental Panel on Climate Change (IPCC) launched a landmark workshop report that focused on tackling the climate and biodiversity crises as one.

Now, the current nexus assessment on interlinkages among biodiversity, water, food and health will explore options for sustainable approaches to water, climate change, adaptation and mitigation, food and health systems.

IPBES Executive Secretary Dr Anne Larigauderie says it also shows that there is hope for restoring the balance of nature.

“I would like people to remember and know that they are a part of nature, that the solutions for our common future are in nature; that nature can be conserved and restored to allow us, human beings, to simultaneously meet all our development goals. We can do this if we work together, act more based on equity, social and environmental justice, reflect on our values systems, and on our visions of what a good life actually is.”